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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST004165
species:
Oryza sativa
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAAGACTTTCTAGCATTGCCC
miRNA*
GTAATGCTAGAATGACTTACA
mismatches:
3
bulges:
0
View larger
pre-miRNA
ATTA
TAAGACTTTCTAGCATTGCCC
ACATTCATATATATGTTAATGAATCTAGATATATATGCGTGCCTACATTCATTAACATCTATATGAATGTGG
GTA
ATGCTAGAATGACTTACA
T
dot-bracket secondary structure
....
((((...((((((((((((((
(((((((((((.((((((((((((.(((.(((......))).))).)))))))))))).)))))))))))))
)))
)))))))))...))))..
.
SIMILARITIES
miRBase
osa-MIR819e
:
2e-45
PMRD
osa-miR819e
:
2e-45
microPC
miR1120
:
5e-22
UniProt
no hits
RFAM
MIR1122: 1e-44
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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